BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034A08LP1|AL429839
(894 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1567 1768 0.0
>3x_Contig1567
Length = 11673
Score = 1768 bits (892), Expect = 0.0
Identities = 892/892 (100%)
Strand = Plus / Minus
Query: 3 atcaacccgatctgaacattttgttcatcggatctcgtatattcagcatgagaccactta 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1469 atcaacccgatctgaacattttgttcatcggatctcgtatattcagcatgagaccactta 1410
Query: 63 tgagcagcttccccaggcttatattcgatccatgagttccctgttggatcatctataacg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1409 tgagcagcttccccaggcttatattcgatccatgagttccctgttggatcatctataacg 1350
Query: 123 aaagttatgggcaaagtaccatctttgcatgcgattgtgtcctttactttgtcaataaat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1349 aaagttatgggcaaagtaccatctttgcatgcgattgtgtcctttactttgtcaataaat 1290
Query: 183 gcctggatctggtcgtataatggcttgtcgatcttctctcttaaaggctgatcactttcc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1289 gcctggatctggtcgtataatggcttgtcgatcttctctcttaaaggctgatcactttcc 1230
Query: 243 aaatcatccaccatttcacttagtagaccttctacagtagtgagctgtccacgtttccct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1229 aaatcatccaccatttcacttagtagaccttctacagtagtgagctgtccacgtttccct 1170
Query: 303 gggatttcaagatctaattccacgaacttacagctagcagtctcagacttgatgacttgt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1169 gggatttcaagatctaattccacgaacttacagctagcagtctcagacttgatgacttgt 1110
Query: 363 ctgttgaaatcgtccttctcttccactttcaacatgtatttagaacccttctcttggatc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1109 ctgttgaaatcgtccttctcttccactttcaacatgtatttagaacccttctcttggatc 1050
Query: 423 tcagaagcaggctggatctcacaattcttgaaaccacagtgttcacaggcgaaagacata 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 tcagaagcaggctggatctcacaattcttgaaaccacagtgttcacaggcgaaagacata 990
Query: 483 agaactacttctctaaagtaaggaatcctcgtcaacaataatctggtagtacccatttta 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 agaactacttctctaaagtaaggaatcctcgtcaacaataatctggtagtacccatttta 930
Query: 543 tgacagttcatacataaggatggaatttcctgtactggatgacccatagcatcaaaggca 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 tgacagttcatacataaggatggaatttcctgtactggatgacccatagcatcaaaggca 870
Query: 603 ccggtttgaactaacccagtatcatctgcctggttttctccgttttgagttgtaccctgt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 ccggtttgaactaacccagtatcatctgcctggttttctccgttttgagttgtaccctgt 810
Query: 663 tgcccctcattggcatgttcagcgtcttctacaatctcaccaactggtttaaataagtct 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tgcccctcattggcatgttcagcgtcttctacaatctcaccaactggtttaaataagtct 750
Query: 723 tctggcatgttgttcaaaaagcgtgaattattaaatttagtctccaatatgggcaattta 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tctggcatgttgttcaaaaagcgtgaattattaaatttagtctccaatatgggcaattta 690
Query: 783 ttgattctcacactcaaacctaacaaatgataaaatgtgacactttccactagtaaagca 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ttgattctcacactcaaacctaacaaatgataaaatgtgacactttccactagtaaagca 630
Query: 843 acaaatgcaacaacgtgaattgaccttaaatgtacgatttcacaccgaagtt 894
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 acaaatgcaacaacgtgaattgaccttaaatgtacgatttcacaccgaagtt 578
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5892
Number of Sequences: 1807
Number of extensions: 5892
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)